Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015808683.1_cds_XP_016495439.1_9755
CDS Infomation

[gene=LOC107814521] [db_xref=GeneID:107814521] [protein=3-isopropylmalate dehydrogenase, chloroplastic] [protein_id=XP_016495439.1] [location=join(1386..1547,1776..2096,2175..2411,2570..2679,2758..2830,6215..6406)] [gbkey=CDS]
Sequence

ATGGCTTTTCAGATTGCGAGAAGACTCCTACGTAGCCGCGCTAGTTCGTCGATTAGGTAT
TTGGATCGGAGCTTCAGTTCGGAGTCCAATTCGAATTTGATCCGCGCTACTCTTTTCCCC
GGCGATGGTATTGGCCCTGAGATCGCCGACTCCGTCAGACAGATTTTCAAGACTGCTGAG
GTACCAATTGAATGGGAAGAACACTATGTAGGGAAGGAGATAGACCCTAGAACCAATAGT
TTTCTGACATGGGAGAGTCTTGAATCAGTGAGAAGAAATAAGGTTGGTTTGAAAGGGCCA
ATGGCTACACCTATCGGGAAAGGTCATCGTTCCTTGAACCTTACATTGAGGAAAGAGTTA
AATCTATATGCCAATGTTAGACCTTGCTACAGCCTACCTGGATACAAGACTCGCTACGAT
GATGTCAATCTCATTACTATCAGGGAAAACACTGAAGGAGAGTACAGTGGTCTGGAACAT
CAAGTCGTAAGGGGTGTGGTTGAAAGTCTCAAGATCATCACTCGTCAAGCAAGCTTAAGG
GTTGCGGAGTACGCGTTTCACTATGCCAAGGCTCATGGAAGAGAGAGAGTGTCTGCAATT
CACAAAGCTAACATCATGCAAAAGACTGATGGTCTTTTCCTTAAGTGTTGCCGAGAGGTA
GCAGAGAAGTACCCTGAGATAAAGTATGAGGAAGTTGTCATTGACAATTGTTGTATGATG
CTTGTGAAAAATCCAGCACTTTTTGATGTTTTGGTGATGCCTAACCTTTATGGTGACATT
ATCAGTGACCTTTGTGCTGGTCTGATTGGTGGTTTGGGCCTAACTCCAAGTTGCAATATT
GGTGAGGGAGGTATTGCTCTTGCTGAGGCTGTGCATGGTTCAGCACCTGATATTGCTGGA
AAGAACTTGGCAAATCCAACTGCTTTGCTTTTGAGTGCTGTAACCATGCTACGGCATTTG
GAGCTTCATGATAAAGCTGATCGTATCCAAGGTGCTGTCCTAAACACAATTGCGGAGGGG
AAGTACCGAACAGGTGATCTTGGTGGTACTTCATCAACTACTGACTTCACAAATGCTATC
TGTGACCATCTTTAA

Peptide Sequence

PEP ID

XP_016495439.1
PEP Infomation

PREDICTED: 3-isopropylmalate dehydrogenase, chloroplastic [Nicotiana tabacum]
Sequence

MAFQIARRLLRSRASSSIRYLDRSFSSESNSNLIRATLFPGDGIGPEIADSVRQIFKTAE
VPIEWEEHYVGKEIDPRTNSFLTWESLESVRRNKVGLKGPMATPIGKGHRSLNLTLRKEL
NLYANVRPCYSLPGYKTRYDDVNLITIRENTEGEYSGLEHQVVRGVVESLKIITRQASLR
VAEYAFHYAKAHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEIKYEEVVIDNCCMM
LVKNPALFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAG
KNLANPTALLLSAVTMLRHLELHDKADRIQGAVLNTIAEGKYRTGDLGGTSSTTDFTNAI
CDHL

Transcript Sequence

Gene sequence data has not been registered.